EnhancerDB
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  3. rs538753527[chr19:6098414]
Enhancers that have rs538753527[chr19:6098414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538753527[chr19:6098414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6098405 6098417 PKNOX1 JASPAR yes 112256742
chr19 6098405 6098417 TGIF1 JASPAR yes 112256743
chr19 6098405 6098418 ZBTB18 JASPAR yes 112256744
chr19 6098406 6098416 FIGLA JASPAR yes 112256745
chr19 6098406 6098416 ID4 JASPAR yes 112256746
chr19 6098406 6098416 MSC JASPAR yes 112256747
chr19 6098406 6098416 TCF3 JASPAR yes 112256748
chr19 6098406 6098416 TCF4 JASPAR yes 112256749
chr19 6098407 6098416 SNAI2 JASPAR yes 112256750
Genes associated with rs538753527[chr19:6098414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More