EnhancerDB
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  3. rs538758116[chr6:138089660]
Enhancers that have rs538758116[chr6:138089660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 138080385 138107115 enh9377
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Uterus Thymus Stomach
chr6 138089315 138089719 vista53744
VISTA
Transcript factors that have rs538758116[chr6:138089660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 138089548 138089908 IRF1 UCSC Txn Factor no Conserved 108541854
chr6 138089655 138089666 NFKB1 JASPAR yes 70446099
chr6 138089655 138089666 NFKB1 JASPAR yes 105673619
chr6 138089656 138089666 NFKB1 JASPAR yes 70446100
chr6 138089656 138089666 NFKB1 JASPAR yes 105673620
Genes associated with rs538758116[chr6:138089660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More