EnhancerDB
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  3. rs538778957[chr17:59408003]
Enhancers that have rs538778957[chr17:59408003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs538778957[chr17:59408003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59407988 59408003 RFX5 JASPAR yes 55149467
chr17 59407992 59408007 RUNX2 JASPAR yes 55149468
Genes associated with rs538778957[chr17:59408003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More