EnhancerDB
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  3. rs538819087[chr12:50914877]
Enhancers that have rs538819087[chr12:50914877]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538819087[chr12:50914877]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50914868 50914883 SCRT1 JASPAR yes 120837387
chr12 50914871 50914892 IRF1 JASPAR yes 120837388
chr12 50914873 50914888 STAT2 JASPAR yes 120837389
chr12 50914874 50914888 STAT1 JASPAR yes 120837390
chr12 50914874 50914895 IRF1 JASPAR yes 120837391
chr12 50914875 50914896 IRF1 JASPAR yes 120837392
chr12 50914876 50914891 FOXP1 JASPAR yes 120837393
chr12 50914876 50914897 IRF1 JASPAR yes 120837394
chr12 50914877 50914892 FOXP1 JASPAR yes 120837395
chr12 50914877 50914898 IRF1 JASPAR yes 120837396
Genes associated with rs538819087[chr12:50914877], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More