EnhancerDB
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  3. rs538827629[chr17:62187566]
Enhancers that have rs538827629[chr17:62187566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62177725 62201515 enh17291
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs538827629[chr17:62187566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62187565 62187580 FOXP1 JASPAR yes 55278956
chr17 62187565 62187586 IRF1 JASPAR yes 55278957
chr17 62187566 62187577 FOXP2 JASPAR yes 55278958
chr17 62187566 62187578 FOXC2 JASPAR yes 55278959
chr17 62187566 62187581 STAT2 JASPAR yes 55278960
Genes associated with rs538827629[chr17:62187566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More