EnhancerDB
  1. Home
  2. SNP
  3. rs538833953[chr1:21663025]
Enhancers that have rs538833953[chr1:21663025]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538833953[chr1:21663025]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21662920 21664371 TCF7L2 GTRD no Colon (HCT116) 107802355
chr1 21663020 21663035 MEF2C JASPAR yes 27298036
chr1 21663021 21663036 MEF2A JASPAR yes 27298037
chr1 21663022 21663034 MEF2A JASPAR yes 27298038
chr1 21663022 21663034 MEF2B JASPAR yes 27298039
chr1 21663022 21663034 MEF2D JASPAR yes 27298040
Genes associated with rs538833953[chr1:21663025], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More