EnhancerDB
  1. Home
  2. SNP
  3. rs538844049[chr12:52601568]
Enhancers that have rs538844049[chr12:52601568]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538844049[chr12:52601568]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52600790 52601632 TCF7L2 GTRD no Colon (HCT116) 21546663
chr12 52600914 52601614 TCF7L2 GTRD no Colon (HCT116) 21546667
chr12 52601000 52601620 TCF7L2 GTRD no Colon (HCT116) 21546668
chr12 52601221 52601871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546670
chr12 52601451 52602101 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546671
chr12 52601537 52602087 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546672
chr12 52601550 52602060 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546673
chr12 52601564 52601575 FLI1 JASPAR yes 120928028
chr12 52601564 52601579 AR JASPAR yes 120928029
chr12 52601565 52601575 ELK3 JASPAR yes 120928030
chr12 52601565 52601575 ERF JASPAR yes 120928031
chr12 52601565 52601575 ERG JASPAR yes 120928032
chr12 52601565 52601575 ETS1 JASPAR yes 120928033
chr12 52601565 52601575 ETV6 JASPAR yes 120928034
chr12 52601565 52601575 FEV JASPAR yes 120928035
chr12 52601565 52601575 FLI1 JASPAR yes 120928036
chr12 52601565 52601575 GABPA JASPAR yes 120928037
chr12 52601565 52601576 ETV2 JASPAR yes 120928038
chr12 52601565 52601578 ELF1 JASPAR yes 120928039
chr12 52601566 52601573 SPI1 JASPAR yes 120928040
chr12 52601566 52601574 EHF JASPAR yes 120928041
chr12 52601566 52601574 FEV JASPAR yes 120928042
Genes associated with rs538844049[chr12:52601568], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More