EnhancerDB
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  3. rs538866531[chr17:56073844]
Enhancers that have rs538866531[chr17:56073844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56068785 56080363 enh4497
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538866531[chr17:56073844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56073841 56073856 FOXP1 JASPAR yes 55005037
chr17 56073842 56073857 FOXP1 JASPAR yes 55005038
chr17 56073843 56073849 TBP TRANSFAC yes 55005039
chr17 56073843 56073858 FOXP1 JASPAR yes 55005040
chr17 56073843 56073864 IRF1 JASPAR yes 55005041
chr17 56073844 56073859 FOXP1 JASPAR yes 55005042
chr17 56073844 56073865 IRF1 JASPAR yes 55005043
Genes associated with rs538866531[chr17:56073844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More