EnhancerDB
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  3. rs539001563[chr17:62708866]
Enhancers that have rs539001563[chr17:62708866]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539001563[chr17:62708866]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 21779174
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282599
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282600
chr17 62707940 62712845 ZNF143 GTRD no Epithelial (MCF-7) 21779478
chr17 62708253 62712819 ZNF143 GTRD no Epithelial (MCF-7) 21779479
chr17 62708253 62712921 ZNF143 GTRD no Epithelial (MCF-7) 21779480
chr17 62708302 62711571 ZNF143 GTRD no Epithelial (MCF-7) 21779481
chr17 62708489 62708987 ZNF274 GTRD no Bone Marrow (K562) 21779482
chr17 62708531 62709006 ZBTB33 GTRD no Brain (SK-N-SH) 21779483
chr17 62708567 62709086 ZNF274 GTRD no Bone Marrow (K562) 21779484
chr17 62708579 62709049 ZNF274 GTRD no Bone Marrow (K562) 21779486
chr17 62708587 62708976 ZNF143 GTRD no Epithelial (MCF-7) 21779487
chr17 62708658 62708897 ZNF274 GTRD no Bone Marrow (K562) 21779488
chr17 62708709 62708979 ZNF274 GTRD no Bone Marrow (K562) 21779489
chr17 62708799 62709175 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21779490
Genes associated with rs539001563[chr17:62708866], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More