EnhancerDB
  1. Home
  2. SNP
  3. rs539061588[chr6:11324255]
Enhancers that have rs539061588[chr6:11324255]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11314009 11328675 enh23020
Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
chr6 11323858 11324321 vista50807
VISTA
Transcript factors that have rs539061588[chr6:11324255]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11324040 11324296 SPI1 UCSC Txn Factor no Conserved 108538382
chr6 11324247 11324259 GLI2 JASPAR yes 70308318
chr6 11324247 11324259 GLI2 JASPAR yes 99876214
Genes associated with rs539061588[chr6:11324255], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More