EnhancerDB
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  3. rs539145856[chr6:33575548]
Enhancers that have rs539145856[chr6:33575548]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs539145856[chr6:33575548]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33575533 33575548 SCRT1 JASPAR yes 101160491
chr6 33575537 33575552 MYBL2 JASPAR yes 101160493
chr6 33575542 33575560 MAFF JASPAR yes 101160494
chr6 33575544 33575556 NHLH1 JASPAR yes 101160495
chr6 33575545 33575555 MSC JASPAR yes 101160496
chr6 33575545 33575555 NHLH1 JASPAR yes 101160497
chr6 33575545 33575555 TFAP4 JASPAR yes 101160498
Genes associated with rs539145856[chr6:33575548], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More