EnhancerDB
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  3. rs539158741[chr1:180500778]
Enhancers that have rs539158741[chr1:180500778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs539158741[chr1:180500778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180499393 180501751 ZNF274 GTRD no Bone Marrow (K562) 21353386
chr1 180500761 180500782 REST JASPAR yes 33522015
chr1 180500762 180500781 REST JASPAR yes 33522016
chr1 180500770 180500779 HIC2 JASPAR yes 33522018
Genes associated with rs539158741[chr1:180500778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More