EnhancerDB
  1. Home
  2. SNP
  3. rs539162318[chr2:223967998]
Enhancers that have rs539162318[chr2:223967998]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 223952805 223969224 enh34313
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Astrocyte Stomach Muscle (A673) Thyroid Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs539162318[chr2:223967998]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 223967989 223967998 SOX9 JASPAR yes 81240779
chr2 223967989 223968010 IRF1 JASPAR yes 81240780
chr2 223967990 223968005 FOXP1 JASPAR yes 81240781
chr2 223967990 223968011 IRF1 JASPAR yes 81240782
chr2 223967991 223968000 SRY JASPAR yes 81240783
chr2 223967991 223968003 FOXC2 JASPAR yes 81240784
chr2 223967992 223968007 FOXP1 JASPAR yes 81240785
chr2 223967996 223968011 FOXP1 JASPAR yes 81240786
chr2 223967996 223968011 MEF2C JASPAR yes 81240787
Genes associated with rs539162318[chr2:223967998], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More