EnhancerDB
  1. Home
  2. SNP
  3. rs539163936[chr1:21630808]
Enhancers that have rs539163936[chr1:21630808]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539163936[chr1:21630808]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21630805 21630820 FOXP1 JASPAR yes 27293341
chr1 21630806 21630821 FOXP1 JASPAR yes 27293342
chr1 21630807 21630822 FOXP1 JASPAR yes 27293343
chr1 21630807 21630828 IRF1 JASPAR yes 27293344
chr1 21630808 21630823 FOXP1 JASPAR yes 27293345
chr1 21630808 21630829 IRF1 JASPAR yes 27293346
Genes associated with rs539163936[chr1:21630808], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More