EnhancerDB
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  3. rs539168231[chr6:17715661]
Enhancers that have rs539168231[chr6:17715661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
chr6 17714698 17716584 vista1417
VISTA
Transcript factors that have rs539168231[chr6:17715661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17715251 17715676 JUND UCSC Txn Factor no Conserved 107693908
chr6 17715251 17715676 JUND UCSC Txn Factor no Conserved 108538938
chr6 17715321 17715661 JUN UCSC Txn Factor no Conserved 107693909
chr6 17715321 17715661 JUN UCSC Txn Factor no Conserved 108538939
chr6 17715652 17715663 NFE2L2 JASPAR yes 22254180
chr6 17715652 17715663 NFE2L2 JASPAR yes 100396052
chr6 17715659 17715665 TCF4 TRANSFAC yes 22254181
chr6 17715659 17715665 TCF4 TRANSFAC yes 100396053
Genes associated with rs539168231[chr6:17715661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More