EnhancerDB
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  3. rs539174592[chr16:81215493]
Enhancers that have rs539174592[chr16:81215493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81205376 81217272 enh16834
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Lung (A549) Stomach Placenta Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs539174592[chr16:81215493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81213875 81216456 TCF7L2 GTRD no Colon (HCT116) 21716888
chr16 81213907 81215561 TCF7L2 GTRD no Colon (HCT116) 21716889
chr16 81214250 81215557 ZBTB33 GTRD no Lung (A549) 21716891
chr16 81214259 81215523 ZBTB33 GTRD no Lung (A549) 21716892
chr16 81214316 81215585 ZNF143 GTRD no Epithelial (MCF-7) 21716893
chr16 81214316 81215606 ZNF143 GTRD no Epithelial (MCF-7) 21716894
chr16 81214341 81215528 ZNF143 GTRD no Epithelial (MCF-7) 21716896
chr16 81214385 81215553 ZNF143 GTRD no Epithelial (MCF-7) 21716897
chr16 81214422 81215563 ZNF143 GTRD no Epithelial (MCF-7) 21716898
chr16 81214487 81215511 ZNF143 GTRD no Epithelial (MCF-7) 21716903
chr16 81214517 81216610 ZNF143 GTRD no Epithelial (MCF-7) 21716907
chr16 81214536 81216591 ZNF143 GTRD no Epithelial (MCF-7) 21716911
chr16 81214538 81215575 ZNF143 GTRD no Epithelial (MCF-7) 21716912
chr16 81214544 81215587 ZNF143 GTRD no Epithelial (MCF-7) 21716913
chr16 81214625 81215518 ZNF143 GTRD no Epithelial (MCF-7) 21716923
chr16 81214688 81215608 ZNF143 GTRD no Epithelial (MCF-7) 21716932
chr16 81214698 81216486 TCF7L2 GTRD no Colon (HCT116) 21716937
chr16 81214723 81215884 ZNF143 GTRD no Epithelial (MCF-7) 21716946
chr16 81215183 81215542 ZNF274 GTRD no Liver (HepG2) 21716991
chr16 81215483 81215497 GATA2 JASPAR yes 11813556
chr16 81215487 81215495 GATA5 JASPAR yes 11813557
Genes associated with rs539174592[chr16:81215493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More