EnhancerDB
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  3. rs539199906[chr12:53253706]
Enhancers that have rs539199906[chr12:53253706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs539199906[chr12:53253706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53250445 53253718 ZBTB33 GTRD no Lung (A549) 21547327
chr12 53250870 53253923 ZNF143 GTRD no Epithelial (MCF-7) 21547332
chr12 53250910 53254386 ZNF274 GTRD no Cervix (HeLa-S3) 21547338
chr12 53250910 53254386 ZNF274 GTRD no Cervix (HeLa-S3) 108034364
chr12 53250931 53253881 ZNF143 GTRD no Epithelial (MCF-7) 21547347
chr12 53251476 53253939 ZBTB33 GTRD no Lung (A549) 21547476
chr12 53251478 53254359 ZNF143 GTRD no Epithelial (MCF-7) 21547477
chr12 53251478 53254359 ZNF143 GTRD no Epithelial (MCF-7) 108034365
chr12 53251505 53254273 ZNF143 GTRD no Epithelial (MCF-7) 21547483
chr12 53251505 53254273 ZNF143 GTRD no Epithelial (MCF-7) 108034366
chr12 53251511 53253913 ZNF143 GTRD no Epithelial (MCF-7) 21547485
chr12 53253129 53253794 ZNF274 GTRD no Bone Marrow (K562) 21547545
chr12 53253396 53253708 ZNF274 GTRD no Bone Marrow (K562) 21547546
chr12 53253703 53253821 ZNF274 GTRD no Liver (HepG2) 21547547
Genes associated with rs539199906[chr12:53253706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More