EnhancerDB
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  3. rs539201384[chr3:16112643]
Enhancers that have rs539201384[chr3:16112643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 16088245 16123415 enh20381
Liver Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs539201384[chr3:16112643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 16112624 16112643 PAX5 JASPAR yes 697829
chr3 16112627 16112644 PAX1 JASPAR yes 697830
Genes associated with rs539201384[chr3:16112643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More