EnhancerDB
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  3. rs539207269[chr1:224689231]
Enhancers that have rs539207269[chr1:224689231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224679026 224701215 enh12719
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539207269[chr1:224689231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224689224 224689235 FOXC1 JASPAR yes 35707616
chr1 224689227 224689242 FOXP1 JASPAR yes 35707618
chr1 224689229 224689244 MEF2C JASPAR yes 35707619
Genes associated with rs539207269[chr1:224689231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More