EnhancerDB
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  3. rs539252827[chr1:91472862]
Enhancers that have rs539252827[chr1:91472862]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 91471465 91485939 enh486
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs539252827[chr1:91472862]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 91472738 91473002 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813926
chr1 91472860 91472877 ESR1 JASPAR yes 30680823
Genes associated with rs539252827[chr1:91472862], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More