EnhancerDB
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  3. rs539254295[chr12:53757449]
Enhancers that have rs539254295[chr12:53757449]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53754815 53768707 enh2366
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs539254295[chr12:53757449]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53753528 53758059 ZNF274 GTRD no Cervix (HeLa-S3) 21549173
chr12 53756295 53758045 ZNF274 GTRD no Bone Marrow (K562) 21549197
chr12 53756398 53757657 ZNF143 GTRD no Epithelial (MCF-7) 21549199
chr12 53756439 53757898 ZNF143 GTRD no Epithelial (MCF-7) 21549200
chr12 53756442 53757964 ZNF143 GTRD no Epithelial (MCF-7) 21549201
chr12 53756580 53757562 ZNF274 GTRD no Bone Marrow (K562) 21549204
chr12 53756645 53758114 ZNF274 GTRD no Cervix (HeLa-S3) 21549205
chr12 53756742 53757925 ZNF143 GTRD no Epithelial (MCF-7) 21549206
chr12 53756756 53757939 ZNF143 GTRD no Epithelial (MCF-7) 21549207
chr12 53756806 53757652 ZNF274 GTRD no Bone Marrow (K562) 21549208
chr12 53756811 53757798 ZNF274 GTRD no Cervix (HeLa-S3) 21549209
chr12 53756815 53757604 ZNF143 GTRD no Epithelial (MCF-7) 21549210
chr12 53756825 53757921 ZNF274 GTRD no Bone Marrow (K562) 21549211
chr12 53756847 53757585 TCF7L2 GTRD no Colon (HCT116) 21549212
chr12 53756860 53757669 ZNF143 GTRD no Epithelial (MCF-7) 21549213
chr12 53756862 53757815 ZNF274 GTRD no Bone Marrow (K562) 21549214
chr12 53756865 53757723 ZNF274 GTRD no Bone Marrow (K562) 21549215
chr12 53756879 53757865 ZNF274 GTRD no Bone Marrow (K562) 21549216
chr12 53756883 53757672 ZNF274 GTRD no Bone Marrow (K562) 21549217
chr12 53756909 53757769 ZNF274 GTRD no Bone Marrow (K562) 21549218
chr12 53756915 53757525 ZNF143 GTRD no Epithelial (MCF-7) 21549219
chr12 53756922 53757901 ZNF143 GTRD no Epithelial (MCF-7) 21549220
chr12 53756941 53757924 ZNF143 GTRD no Epithelial (MCF-7) 21549221
chr12 53756944 53757618 ZNF143 GTRD no Epithelial (MCF-7) 21549222
chr12 53756946 53757725 ZNF274 GTRD no Bone Marrow (K562) 21549223
chr12 53756948 53757597 ZNF274 GTRD no Cervix (HeLa-S3) 21549224
chr12 53756951 53757537 ZNF143 GTRD no Epithelial (MCF-7) 21549225
chr12 53757042 53757498 ZNF274 GTRD no Cervix (HeLa-S3) 21549227
chr12 53757044 53757637 ZNF274 GTRD no Bone Marrow (K562) 21549228
chr12 53757106 53757635 ZNF274 GTRD no Bone Marrow (K562) 21549229
chr12 53757108 53757624 ZNF143 GTRD no Epithelial (MCF-7) 21549230
chr12 53757135 53757706 ZNF274 GTRD no Cervix (HeLa-S3) 21549231
chr12 53757164 53757499 ZNF274 GTRD no Bone Marrow (K562) 21549234
chr12 53757186 53757545 ZNF274 GTRD no Bone Marrow (K562) 21549235
chr12 53757446 53757450 NFE TRANSFAC yes 120982331
chr12 53757446 53757461 TFAP2C JASPAR yes 120982332
chr12 53757447 53757452 GATA2 JASPAR yes 120982333
chr12 53757447 53757461 GLIS3 JASPAR yes 120982334
chr12 53757449 53757460 EBF1 JASPAR yes 120982335
Genes associated with rs539254295[chr12:53757449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More