EnhancerDB
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  3. rs539260791[chr1:8496196]
Enhancers that have rs539260791[chr1:8496196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539260791[chr1:8496196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8496190 8496202 YY1 JASPAR yes 26553838
chr1 8496194 8496205 CEBPB JASPAR yes 26553839
chr1 8496195 8496208 NFKB1 JASPAR yes 26553840
chr1 8496195 8496208 NFKB2 JASPAR yes 26553841
Genes associated with rs539260791[chr1:8496196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More