EnhancerDB
  1. Home
  2. SNP
  3. rs539275913[chr1:16491050]
Enhancers that have rs539275913[chr1:16491050]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539275913[chr1:16491050]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16491040 16491052 CREB1 JASPAR yes 27029756
chr1 16491040 16491055 JUND JASPAR yes 27029757
chr1 16491041 16491054 JUN JASPAR yes 27029758
chr1 16491042 16491056 ATF7 JASPAR yes 27029759
chr1 16491042 16491056 BATF3 JASPAR yes 27029760
chr1 16491043 16491055 JDP2 JASPAR yes 27029761
chr1 16491043 16491058 JUND JASPAR yes 27029762
chr1 16491044 16491057 JUN JASPAR yes 27029763
chr1 16491045 16491050 ATF1 TRANSFAC yes 27029764
chr1 16491045 16491053 CREB1 JASPAR yes 27029765
chr1 16491046 16491058 CREB1 JASPAR yes 27029766
chr1 16491047 16491052 ATF1 TRANSFAC yes 27029767
Genes associated with rs539275913[chr1:16491050], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More