EnhancerDB
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  3. rs539288371[chr1:208367286]
Enhancers that have rs539288371[chr1:208367286]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208343485 208368555 enh12612
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs539288371[chr1:208367286]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208367275 208367286 PROP1 JASPAR yes 34905761
chr1 208367277 208367287 HOXD13 JASPAR yes 34905762
chr1 208367277 208367288 HOXA10 JASPAR yes 34905763
chr1 208367284 208367290 TBP TRANSFAC yes 34905764
Genes associated with rs539288371[chr1:208367286], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More