EnhancerDB
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  3. rs539293824[chr3:11280454]
Enhancers that have rs539293824[chr3:11280454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 11276343 11290535 enh20323
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Placenta Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs539293824[chr3:11280454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 11280449 11280454 TBP TRANSFAC yes 408349
chr3 11280449 11280455 TMF TRANSFAC yes 408350
chr3 11280451 11280464 DUXA JASPAR yes 408351
chr3 11280452 11280463 DUX4 JASPAR yes 408352
Genes associated with rs539293824[chr3:11280454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More