EnhancerDB
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  3. rs539303626[chr1:27911712]
Enhancers that have rs539303626[chr1:27911712]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs539303626[chr1:27911712]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27911698 27911717 PAX5 JASPAR yes 27712470
chr1 27911701 27911718 PAX1 JASPAR yes 27712471
chr1 27911701 27911718 PAX9 JASPAR yes 27712472
Genes associated with rs539303626[chr1:27911712], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More