EnhancerDB
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  3. rs539315394[chr1:1836398]
Enhancers that have rs539315394[chr1:1836398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1835043 1841115 enh8
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs539315394[chr1:1836398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1836384 1836398 GLIS2 JASPAR yes 26212550
chr1 1836384 1836398 GLIS3 JASPAR yes 26212551
chr1 1836384 1836399 ZIC3 JASPAR yes 26212552
chr1 1836384 1836399 ZIC4 JASPAR yes 26212553
Genes associated with rs539315394[chr1:1836398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More