EnhancerDB
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  3. rs539344963[chr2:232489674]
Enhancers that have rs539344963[chr2:232489674]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs539344963[chr2:232489674]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232489659 232489674 FOXP1 JASPAR yes 81727775
chr2 232489660 232489675 FOXP1 JASPAR yes 81727776
chr2 232489673 232489688 IRF9 JASPAR yes 81727777
Genes associated with rs539344963[chr2:232489674], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More