EnhancerDB
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  3. rs539378625[chr1:183840230]
Enhancers that have rs539378625[chr1:183840230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 183836405 183849075 enh12458
Prostate (PC-3) Cervix (HeLa-S3) Ovary Esophagus Astrocyte Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Uterus Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs539378625[chr1:183840230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 183840004 183840676 ZBTB33 GTRD no Lung (A549) 107851185
chr1 183840025 183840657 ZBTB33 GTRD no Brain (SK-N-SH) 107851186
chr1 183840218 183840239 IRF1 JASPAR yes 33712532
chr1 183840220 183840235 PRDM1 JASPAR yes 33712533
chr1 183840220 183840235 STAT2 JASPAR yes 33712534
Genes associated with rs539378625[chr1:183840230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More