EnhancerDB
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  3. rs539379020[chr11:2715008]
Enhancers that have rs539379020[chr11:2715008]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 2707065 2737815 enh1611
Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs539379020[chr11:2715008]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 2714603 2715449 TCF7L2 GTRD no Colon (HCT116) 107952941
chr11 2714676 2715346 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21466756
chr11 2714676 2715346 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107952946
chr11 2714693 2715069 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21466757
chr11 2714693 2715069 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107952947
chr11 2714775 2715031 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21466758
chr11 2714775 2715031 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107952948
chr11 2714896 2716341 TCF7L2 GTRD no Colon (HCT116) 107952950
chr11 2714928 2715304 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21466760
chr11 2714928 2715304 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107952951
chr11 2714943 2715260 ZNF143 GTRD no Epithelial (MCF-7) 107952952
chr11 2714945 2715617 TCF7L2 GTRD no Colon (HCT116) 107952953
chr11 2714992 2715012 TP63 JASPAR yes 37022902
chr11 2714993 2715011 TP53 JASPAR yes 37022903
chr11 2714995 2715010 TP53 JASPAR yes 37022904
chr11 2715001 2715008 SP1 TRANSFAC yes 37022906
Genes associated with rs539379020[chr11:2715008], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More