EnhancerDB
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  3. rs539379056[chr17:59391710]
Enhancers that have rs539379056[chr17:59391710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs539379056[chr17:59391710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59391017 59391812 ZNF143 GTRD no Epithelial (MCF-7) 21777323
chr17 59391017 59391812 ZNF143 GTRD no Epithelial (MCF-7) 108279395
chr17 59391699 59391714 FOXP1 JASPAR yes 55147043
chr17 59391700 59391711 FOXA1 JASPAR yes 55147044
chr17 59391700 59391715 FOXA1 JASPAR yes 55147045
chr17 59391701 59391712 FOXB1 JASPAR yes 55147046
chr17 59391701 59391713 FOXC2 JASPAR yes 55147047
chr17 59391702 59391713 FOXP2 JASPAR yes 55147048
chr17 59391703 59391711 FOXO3 JASPAR yes 55147049
chr17 59391704 59391711 FOXD2 JASPAR yes 55147050
chr17 59391704 59391711 FOXI1 JASPAR yes 55147051
chr17 59391704 59391711 FOXL1 JASPAR yes 55147052
chr17 59391704 59391711 FOXO4 JASPAR yes 55147053
chr17 59391704 59391711 FOXO6 JASPAR yes 55147054
chr17 59391704 59391711 FOXP3 JASPAR yes 55147055
chr17 59391704 59391712 FOXD1 JASPAR yes 55147056
chr17 59391704 59391712 FOXO3 JASPAR yes 55147057
Genes associated with rs539379056[chr17:59391710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More