EnhancerDB
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  3. rs539389328[chr17:59403458]
Enhancers that have rs539389328[chr17:59403458]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs539389328[chr17:59403458]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59403445 59403460 RUNX2 JASPAR yes 55148744
chr17 59403449 59403459 RUNX3 JASPAR yes 55148745
chr17 59403450 59403459 RUNX2 JASPAR yes 55148746
Genes associated with rs539389328[chr17:59403458], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More