EnhancerDB
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  3. rs539394122[chr1:223891813]
Enhancers that have rs539394122[chr1:223891813]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539394122[chr1:223891813]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223891804 223891816 YY1 JASPAR yes 35669945
chr1 223891808 223891819 CEBPB JASPAR yes 35669946
chr1 223891809 223891822 NFKB1 JASPAR yes 35669947
chr1 223891809 223891822 NFKB2 JASPAR yes 35669948
Genes associated with rs539394122[chr1:223891813], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More