EnhancerDB
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  3. rs539462901[chr1:231519695]
Enhancers that have rs539462901[chr1:231519695]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539462901[chr1:231519695]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231519681 231519695 ONECUT1 JASPAR yes 36087163
chr1 231519681 231519695 ONECUT2 JASPAR yes 36087164
chr1 231519681 231519695 ONECUT3 JASPAR yes 36087165
chr1 231519684 231519699 MEF2C JASPAR yes 36087166
chr1 231519689 231519705 SOX8 JASPAR yes 36087167
Genes associated with rs539462901[chr1:231519695], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More