EnhancerDB
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  3. rs539465974[chr12:50936710]
Enhancers that have rs539465974[chr12:50936710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539465974[chr12:50936710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50936223 50937803 ZNF274 GTRD no Bone Marrow (K562) 21545247
chr12 50936223 50937803 ZNF274 GTRD no Bone Marrow (K562) 108031431
chr12 50936230 50936826 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545248
chr12 50936230 50936826 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031432
chr12 50936302 50936822 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545249
chr12 50936302 50936822 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031433
chr12 50936396 50938084 ZNF274 GTRD no Bone Marrow (K562) 21545250
chr12 50936396 50938084 ZNF274 GTRD no Bone Marrow (K562) 108031434
chr12 50936454 50937318 ZNF274 GTRD no Bone Marrow (K562) 21545252
chr12 50936454 50937318 ZNF274 GTRD no Bone Marrow (K562) 108031436
Genes associated with rs539465974[chr12:50936710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More