EnhancerDB
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Enhancers that have rs539469870[chr17:62196268]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62177725 62201515 enh17291
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Thymus Stomach
chr17 62196117 62196293 vista25509
VISTA
Transcript factors that have rs539469870[chr17:62196268]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62195929 62196305 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21778648
chr17 62195929 62196305 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108282281
chr17 62195939 62196329 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108282282
chr17 62195978 62196414 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108282283
chr17 62196050 62196360 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108282284
chr17 62196069 62196345 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108282285
chr17 62196080 62196444 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108282286
chr17 62196116 62196392 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108282287
chr17 62196147 62196301 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108282288
chr17 62196256 62196268 TAL1 JASPAR yes 21273506
chr17 62196256 62196268 TAL1 JASPAR yes 55280104
chr17 62196257 62196269 BHLHE23 JASPAR yes 21273507
chr17 62196257 62196269 BHLHE23 JASPAR yes 55280105
chr17 62196258 62196268 BHLHE22 JASPAR yes 21273508
chr17 62196258 62196268 NEUROD2 JASPAR yes 21273509
chr17 62196258 62196268 NEUROG2 JASPAR yes 21273510
chr17 62196258 62196268 OLIG1 JASPAR yes 21273511
chr17 62196258 62196268 OLIG2 JASPAR yes 21273512
chr17 62196258 62196268 OLIG3 JASPAR yes 21273513
chr17 62196258 62196268 BHLHE22 JASPAR yes 55280106
chr17 62196258 62196268 NEUROD2 JASPAR yes 55280107
chr17 62196258 62196268 NEUROG2 JASPAR yes 55280108
chr17 62196258 62196268 OLIG1 JASPAR yes 55280109
chr17 62196258 62196268 OLIG2 JASPAR yes 55280110
chr17 62196258 62196268 OLIG3 JASPAR yes 55280111
chr17 62196258 62196270 TAL1 JASPAR yes 21273514
chr17 62196258 62196270 TAL1 JASPAR yes 55280112
chr17 62196264 62196275 E2F6 JASPAR yes 21273515
chr17 62196264 62196275 E2F6 JASPAR yes 55280113
chr17 62196268 62196278 SP1 TRANSFAC yes 21273516
chr17 62196268 62196278 SP1 TRANSFAC yes 55280114
Genes associated with rs539469870[chr17:62196268], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More