EnhancerDB
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  3. rs539472995[chr17:34226318]
Enhancers that have rs539472995[chr17:34226318]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs539472995[chr17:34226318]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34225711 34226386 ZNF143 GTRD no Epithelial (MCF-7) 21751105
chr17 34225884 34226636 ZNF143 GTRD no Epithelial (MCF-7) 21751106
chr17 34225937 34226530 ZNF143 GTRD no Epithelial (MCF-7) 21751107
chr17 34225940 34226468 ZNF143 GTRD no Epithelial (MCF-7) 21751108
chr17 34225960 34226442 ZNF143 GTRD no Epithelial (MCF-7) 21751109
chr17 34226037 34226366 ZNF143 GTRD no Epithelial (MCF-7) 21751110
chr17 34226040 34226412 ZNF143 GTRD no Epithelial (MCF-7) 21751111
chr17 34226078 34226533 ZNF143 GTRD no Epithelial (MCF-7) 21751112
chr17 34226108 34226529 ZNF143 GTRD no Epithelial (MCF-7) 21751113
chr17 34226125 34226592 ZNF143 GTRD no Epithelial (MCF-7) 21751114
chr17 34226311 34226325 ONECUT1 JASPAR yes 54020646
chr17 34226311 34226325 ONECUT2 JASPAR yes 54020647
chr17 34226311 34226325 ONECUT3 JASPAR yes 54020648
chr17 34226312 34226322 PAX3 JASPAR yes 54020649
chr17 34226312 34226322 PAX7 JASPAR yes 54020650
Genes associated with rs539472995[chr17:34226318], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More