EnhancerDB
  1. Home
  2. SNP
  3. rs539502900[chr12:64291932]
Enhancers that have rs539502900[chr12:64291932]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 64289845 64301655 enh14779
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs539502900[chr12:64291932]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 64291921 64291932 FOXA1 JASPAR yes 121375311
chr12 64291921 64291936 FOXA1 JASPAR yes 121375312
chr12 64291928 64291942 IRF7 JASPAR yes 121375313
chr12 64291930 64291942 IRF1 JASPAR yes 121375314
Genes associated with rs539502900[chr12:64291932], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More