EnhancerDB
  1. Home
  2. SNP
  3. rs539509243[chr1:27923374]
Enhancers that have rs539509243[chr1:27923374]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs539509243[chr1:27923374]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27923356 27923376 RREB1 JASPAR yes 27714200
chr1 27923358 27923378 RREB1 JASPAR yes 27714201
chr1 27923360 27923380 RREB1 JASPAR yes 27714202
chr1 27923363 27923383 RREB1 JASPAR yes 27714203
chr1 27923364 27923384 RREB1 JASPAR yes 27714204
chr1 27923367 27923382 RUNX2 JASPAR yes 27714205
chr1 27923368 27923388 RREB1 JASPAR yes 27714206
chr1 27923373 27923393 RREB1 JASPAR yes 27714207
Genes associated with rs539509243[chr1:27923374], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More