EnhancerDB
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  3. rs539522122[chr3:57967886]
Enhancers that have rs539522122[chr3:57967886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539522122[chr3:57967886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57967879 57967888 SNAI2 JASPAR yes 2660514
chr3 57967879 57967889 ID4 JASPAR yes 2660515
chr3 57967879 57967889 TCF3 JASPAR yes 2660516
chr3 57967879 57967889 TCF4 JASPAR yes 2660517
chr3 57967884 57967893 HIC2 JASPAR yes 2660518
Genes associated with rs539522122[chr3:57967886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More