EnhancerDB
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  3. rs539543508[chr16:69501940]
Enhancers that have rs539543508[chr16:69501940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69497735 69521555 enh16751
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs539543508[chr16:69501940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69501607 69501947 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21711717
chr16 69501647 69502717 ZNF274 GTRD no Blood (GM12878) 21711718
chr16 69501672 69502608 ZNF274 GTRD no Blood (GM12878) 21711719
chr16 69501675 69502260 ZNF274 GTRD no Bone Marrow (K562) 21711720
chr16 69501679 69502684 ZNF274 GTRD no Blood (GM12878) 21711721
chr16 69501707 69502671 ZNF274 GTRD no Liver (HepG2) 21711723
chr16 69501709 69502818 ZNF274 GTRD no Liver (HepG2) 21711724
chr16 69501713 69502658 ZNF274 GTRD no Liver (HepG2) 21711725
chr16 69501730 69502186 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21711726
chr16 69501730 69502602 ZNF274 GTRD no Blood (GM12878) 21711727
chr16 69501740 69502076 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21711728
chr16 69501742 69502651 ZNF274 GTRD no Blood (GM12878) 21711729
chr16 69501747 69502645 ZNF274 GTRD no Liver (HepG2) 21711730
chr16 69501750 69502638 ZNF274 GTRD no Liver (HepG2) 21711731
chr16 69501752 69502643 ZNF274 GTRD no Liver (HepG2) 21711732
chr16 69501754 69503004 ZNF274 GTRD no Liver (HepG2) 21711733
chr16 69501755 69502641 ZNF274 GTRD no Liver (HepG2) 21711734
chr16 69501761 69502499 ZNF274 GTRD no Liver (HepG2) 21711735
chr16 69501763 69502053 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21711736
chr16 69501767 69502553 ZNF274 GTRD no Liver (HepG2) 21711737
chr16 69501768 69502463 ZNF274 GTRD no Liver (HepG2) 21711738
chr16 69501775 69502654 ZNF274 GTRD no Liver (HepG2) 21711739
chr16 69501776 69502737 ZNF274 GTRD no Liver (HepG2) 21711740
chr16 69501781 69502061 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21711741
chr16 69501791 69502661 ZNF274 GTRD no Liver (HepG2) 21711742
chr16 69501797 69502662 ZNF274 GTRD no Liver (HepG2) 21711743
chr16 69501799 69502593 ZNF274 GTRD no Liver (HepG2) 21711744
chr16 69501803 69502699 ZNF274 GTRD no Blood (GM12878) 21711745
chr16 69501817 69502576 ZNF274 GTRD no Liver (HepG2) 21711746
chr16 69501819 69502387 ZNF274 GTRD no Blood (GM12878) 21711747
chr16 69501826 69502421 ZNF274 GTRD no Blood (GM12878) 21711748
chr16 69501828 69502538 ZNF274 GTRD no Blood (GM12878) 21711749
chr16 69501830 69502314 ZNF274 GTRD no Cervix (HeLa-S3) 21711750
chr16 69501833 69502573 ZNF274 GTRD no Liver (HepG2) 21711751
chr16 69501837 69502292 ZNF274 GTRD no Bone Marrow (K562) 21711752
chr16 69501840 69502418 ZNF274 GTRD no Blood (GM12878) 21711753
chr16 69501851 69502521 ZNF274 GTRD no Liver (HepG2) 21711754
chr16 69501854 69502635 ZNF274 GTRD no Liver (HepG2) 21711755
chr16 69501872 69503075 ZNF274 GTRD no Blood (GM12878) 21711756
chr16 69501873 69502320 ZNF274 GTRD no Bone Marrow (K562) 21711757
chr16 69501877 69502648 ZNF274 GTRD no Liver (HepG2) 21711758
chr16 69501885 69502724 ZNF274 GTRD no Blood (GM12878) 21711759
chr16 69501885 69502736 ZNF274 GTRD no Blood (GM12878) 21711760
chr16 69501893 69502272 ZNF274 GTRD no Bone Marrow (K562) 21711761
chr16 69501898 69502343 ZNF274 GTRD no Blood (GM12878) 21711762
chr16 69501900 69502575 ZNF274 GTRD no Blood (GM12878) 21711763
chr16 69501901 69502413 ZNF274 GTRD no Blood (GM12878) 21711764
chr16 69501916 69502507 ZNF274 GTRD no Blood (GM12878) 21711765
chr16 69501931 69501947 SOX4 JASPAR yes 11270129
chr16 69501932 69501947 SOX21 JASPAR yes 11270130
Genes associated with rs539543508[chr16:69501940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More