EnhancerDB
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  3. rs539543662[chr4:84168206]
Enhancers that have rs539543662[chr4:84168206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 84167627 84180602 enh21641
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs539543662[chr4:84168206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 84168204 84168211 NKX3-1 JASPAR yes 90900831
chr4 84168205 84168213 FOXC1 JASPAR yes 90900832
chr4 84168206 84168215 ZEB1 JASPAR yes 90900833
Genes associated with rs539543662[chr4:84168206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More