EnhancerDB
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  3. rs539550386[chr12:58257229]
Enhancers that have rs539550386[chr12:58257229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58253425 58271915 enh14762
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs539550386[chr12:58257229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58257225 58257229 H1TF2 TRANSFAC yes 121143969
chr12 58257225 58257229 NFE TRANSFAC yes 121143970
chr12 58257225 58257229 SRF TRANSFAC yes 121143971
Genes associated with rs539550386[chr12:58257229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More