EnhancerDB
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  3. rs539554877[chr13:111039796]
Enhancers that have rs539554877[chr13:111039796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 111037685 111076655 enh15498
Brain (SK-N-MC) Liver Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539554877[chr13:111039796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 111039355 111039933 ZNF274 GTRD no Bone Marrow (K562) 108089316
chr13 111039603 111040218 ZNF274 GTRD no Bone Marrow (K562) 108089317
chr13 111039632 111040401 ZNF274 GTRD no Bone Marrow (K562) 108089318
chr13 111039660 111040055 ZNF274 GTRD no Bone Marrow (K562) 108089319
chr13 111039662 111040148 ZNF274 GTRD no Bone Marrow (K562) 108089320
chr13 111039713 111040287 ZNF274 GTRD no Bone Marrow (K562) 108089321
chr13 111039784 111039803 RFX2 JASPAR yes 60346226
chr13 111039787 111040063 ZNF274 GTRD no Bone Marrow (K562) 108089322
chr13 111039790 111039796 ETS1 JASPAR yes 60346228
chr13 111039795 111040149 ZNF274 GTRD no Bone Marrow (K562) 108089323
chr13 111039796 111039811 TFAP2A JASPAR yes 60346229
Genes associated with rs539554877[chr13:111039796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More