EnhancerDB
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  3. rs539568247[chr4:83704125]
Enhancers that have rs539568247[chr4:83704125]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 83692085 83711830 enh8042
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs539568247[chr4:83704125]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 83704122 83704137 ZIC3 JASPAR yes 90878273
chr4 83704124 83704133 SNAI2 JASPAR yes 90878274
chr4 83704125 83704130 USF2 TRANSFAC yes 90878275
Genes associated with rs539568247[chr4:83704125], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More