EnhancerDB
  1. Home
  2. SNP
  3. rs539568977[chr12:95740324]
Enhancers that have rs539568977[chr12:95740324]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 95726252 95768135 enh2529
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Ovary Brain (SK-N-SH) Esophagus Astrocyte Liver Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs539568977[chr12:95740324]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 95740317 95740324 NKX3-1 JASPAR yes 122988145
chr12 95740318 95740332 SPIC JASPAR yes 122988146
Genes associated with rs539568977[chr12:95740324], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More