EnhancerDB
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  3. rs539572498[chr17:25572729]
Enhancers that have rs539572498[chr17:25572729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25561345 25577115 enh17059
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 25572576 25572861 vista24248
VISTA
Transcript factors that have rs539572498[chr17:25572729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25572139 25572789 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747425
chr17 25572139 25572789 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108244849
chr17 25572139 25572789 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108244850
chr17 25572212 25572732 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108244856
chr17 25572243 25572767 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747431
chr17 25572243 25572767 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108244859
chr17 25572264 25572760 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747434
chr17 25572264 25572760 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108244863
chr17 25572362 25572758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747445
chr17 25572362 25572758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108244892
Genes associated with rs539572498[chr17:25572729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More