EnhancerDB
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  3. rs539577536[chr16:68784486]
Enhancers that have rs539577536[chr16:68784486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 68769718 68797188 enh16743
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs539577536[chr16:68784486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 68784478 68784488 ALX3 JASPAR yes 11222002
chr16 68784478 68784488 EMX1 JASPAR yes 11222003
chr16 68784478 68784488 EMX2 JASPAR yes 11222004
chr16 68784478 68784488 EVX2 JASPAR yes 11222005
chr16 68784478 68784488 GSX1 JASPAR yes 11222006
chr16 68784478 68784488 GSX2 JASPAR yes 11222007
chr16 68784478 68784488 HOXA2 JASPAR yes 11222008
chr16 68784478 68784488 HOXB2 JASPAR yes 11222009
chr16 68784478 68784488 HOXB3 JASPAR yes 11222010
chr16 68784478 68784488 MEOX1 JASPAR yes 11222011
chr16 68784478 68784488 MEOX2 JASPAR yes 11222012
chr16 68784478 68784488 NOTO JASPAR yes 11222013
chr16 68784479 68784487 DLX6 JASPAR yes 11222014
chr16 68784479 68784487 EN1 JASPAR yes 11222015
chr16 68784479 68784487 LBX1 JASPAR yes 11222016
chr16 68784479 68784487 PAX4 JASPAR yes 11222017
chr16 68784479 68784487 PDX1 JASPAR yes 11222018
chr16 68784479 68784487 VAX1 JASPAR yes 11222019
chr16 68784479 68784487 VAX2 JASPAR yes 11222020
chr16 68784479 68784487 VSX1 JASPAR yes 11222021
chr16 68784479 68784487 VSX2 JASPAR yes 11222022
chr16 68784479 68784489 POU6F2 JASPAR yes 11222023
Genes associated with rs539577536[chr16:68784486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More