Enhancers that have rs539577556[chr12:109901314]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109894065 109906915 enh14983
chr12 109900993 109901418 vista14851

Transcript factors that have rs539577556[chr12:109901314]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109899386 109901534 ZNF274 GTRD no Blood (GM12878) 108058131
chr12 109899386 109901534 ZNF274 GTRD no Blood (GM12878) 108058132
chr12 109899395 109901770 ZBTB33 GTRD no Lung (A549) 108058133
chr12 109899395 109901770 ZBTB33 GTRD no Lung (A549) 108058134
chr12 109899399 109901688 ZNF143 GTRD no Epithelial (MCF-7) 108058135
chr12 109899399 109901688 ZNF143 GTRD no Epithelial (MCF-7) 108058136
chr12 109899401 109901319 ZBTB33 GTRD no Lung (A549) 108058137
chr12 109899401 109901319 ZBTB33 GTRD no Lung (A549) 108058138
chr12 109899431 109901563 ZBTB33 GTRD no Lung (A549) 108058139
chr12 109899431 109901563 ZBTB33 GTRD no Lung (A549) 108058140
chr12 109899491 109901738 ZNF274 GTRD no Cervix (HeLa-S3) 108058144
chr12 109899491 109901738 ZNF274 GTRD no Cervix (HeLa-S3) 108058145
chr12 109899511 109901979 ZNF274 GTRD no Bone Marrow (K562) 108058147
chr12 109899511 109901979 ZNF274 GTRD no Bone Marrow (K562) 108058148
chr12 109899526 109901392 ZNF274 GTRD no Blood (GM12878) 108058149
chr12 109899526 109901392 ZNF274 GTRD no Blood (GM12878) 108058150
chr12 109899538 109902022 ZBTB33 GTRD no Lung (A549) 108058153
chr12 109899538 109902022 ZBTB33 GTRD no Lung (A549) 108058154
chr12 109899551 109901368 ZNF274 GTRD no Blood (GM12878) 108058155
chr12 109899551 109901368 ZNF274 GTRD no Blood (GM12878) 108058156
chr12 109899607 109901507 ZBTB33 GTRD no Lung (A549) 108058163
chr12 109899607 109901507 ZBTB33 GTRD no Lung (A549) 108058164
chr12 109899621 109901343 TCF7L2 GTRD no Colon (HCT116) 108058167
chr12 109899621 109901343 TCF7L2 GTRD no Colon (HCT116) 108058168
chr12 109899640 109901706 ZBTB33 GTRD no Lung (A549) 108058171
chr12 109899640 109901706 ZBTB33 GTRD no Lung (A549) 108058172
chr12 109899664 109901538 ZNF274 GTRD no Bone Marrow (K562) 108058173
chr12 109899664 109901538 ZNF274 GTRD no Bone Marrow (K562) 108058174
chr12 109899680 109901328 ZNF143 GTRD no Epithelial (MCF-7) 108058179
chr12 109899680 109901328 ZNF143 GTRD no Epithelial (MCF-7) 108058180
chr12 109899697 109901875 ZNF274 GTRD no Bone Marrow (K562) 108058183
chr12 109899697 109901875 ZNF274 GTRD no Bone Marrow (K562) 108058184
chr12 109899728 109901332 ZNF274 GTRD no Blood (GM12878) 108058190
chr12 109899728 109901332 ZNF274 GTRD no Blood (GM12878) 108058191
chr12 109899734 109901640 ZNF274 GTRD no Blood (GM12878) 108058196
chr12 109899734 109901640 ZNF274 GTRD no Blood (GM12878) 108058197
chr12 109899740 109901319 ZBTB33 GTRD no Lung (A549) 108058201
chr12 109899740 109901319 ZBTB33 GTRD no Lung (A549) 108058202
chr12 109899746 109901429 ZNF274 GTRD no Cervix (HeLa-S3) 108058203
chr12 109899746 109901429 ZNF274 GTRD no Cervix (HeLa-S3) 108058204
chr12 109899752 109901531 ZBTB33 GTRD no Lung (A549) 108058207
chr12 109899752 109901531 ZBTB33 GTRD no Lung (A549) 108058208
chr12 109899757 109901441 ZNF274 GTRD no Cervix (HeLa-S3) 108058212
chr12 109899757 109901441 ZNF274 GTRD no Cervix (HeLa-S3) 108058213
chr12 109899759 109901340 ZNF274 GTRD no Blood (GM12878) 108058215
chr12 109899759 109901340 ZNF274 GTRD no Blood (GM12878) 108058216
chr12 109899763 109901445 ZNF274 GTRD no Blood (GM12878) 108058221
chr12 109899763 109901445 ZNF274 GTRD no Blood (GM12878) 108058222
chr12 109899767 109901794 ZNF274 GTRD no Bone Marrow (K562) 108058225
chr12 109899767 109901794 ZNF274 GTRD no Bone Marrow (K562) 108058226
chr12 109899771 109901418 ZBTB33 GTRD no Lung (A549) 108058229
chr12 109899771 109901418 ZBTB33 GTRD no Lung (A549) 108058230
chr12 109899783 109901314 ZNF143 GTRD no Epithelial (MCF-7) 108058250
chr12 109899783 109901314 ZNF143 GTRD no Epithelial (MCF-7) 108058251
chr12 109899808 109901330 ZNF143 GTRD no Epithelial (MCF-7) 108058272
chr12 109899808 109901330 ZNF143 GTRD no Epithelial (MCF-7) 108058273
chr12 109899827 109901422 ZNF274 GTRD no Liver (HepG2) 21571899
chr12 109899827 109901422 ZNF274 GTRD no Liver (HepG2) 108058280
chr12 109899827 109901422 ZNF274 GTRD no Liver (HepG2) 108058281
chr12 109899841 109901439 ZNF274 GTRD no Blood (GM12878) 108058291
chr12 109899841 109901439 ZNF274 GTRD no Blood (GM12878) 108058292
chr12 109899846 109901460 ZNF274 GTRD no Bone Marrow (K562) 108058300
chr12 109899846 109901460 ZNF274 GTRD no Bone Marrow (K562) 108058301
chr12 109899896 109901521 ZNF274 GTRD no Bone Marrow (K562) 108058354
chr12 109899896 109901521 ZNF274 GTRD no Bone Marrow (K562) 108058355
chr12 109899933 109901331 ZNF274 GTRD no Cervix (HeLa-S3) 108058380
chr12 109899933 109901331 ZNF274 GTRD no Cervix (HeLa-S3) 108058381
chr12 109899937 109901342 ZNF274 GTRD no Bone Marrow (K562) 108058388
chr12 109899937 109901342 ZNF274 GTRD no Bone Marrow (K562) 108058389
chr12 109900144 109901379 TCF7L2 GTRD no Colon (HCT116) 108058490
chr12 109900144 109901379 TCF7L2 GTRD no Colon (HCT116) 108058491
chr12 109900823 109901327 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108058518
chr12 109900861 109901337 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108058520
chr12 109900886 109901437 ZNF274 GTRD no Blood (GM12878) 108058521
chr12 109900913 109901509 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108058523
chr12 109900942 109901368 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108058525
chr12 109900993 109901343 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108058529
chr12 109901080 109901390 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108058535
chr12 109901096 109901526 SOX2 GTRD no Neural Stem Cells (H9) 21571935
chr12 109901096 109901526 SOX2 GTRD no Neural Stem Cells (H9) 108058536
chr12 109901104 109901380 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108058537
chr12 109901143 109901663 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108058538
chr12 109901213 109901463 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108058539
chr12 109901310 109901324 GLIS2 JASPAR yes 82474817
chr12 109901310 109901324 GLIS3 JASPAR yes 82474818
chr12 109901310 109901324 GLIS2 JASPAR yes 123642410
chr12 109901310 109901324 GLIS3 JASPAR yes 123642411
chr12 109901314 109901324 ZNF740 JASPAR yes 82474819
chr12 109901314 109901324 ZNF740 JASPAR yes 123642412
chr12 109901314 109901326 ZBTB7B JASPAR yes 82474820
chr12 109901314 109901326 ZBTB7B JASPAR yes 123642413

Genes associated with rs539577556[chr12:109901314], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More