EnhancerDB
  1. Home
  2. SNP
  3. rs539587867[chr19:2529225]
Enhancers that have rs539587867[chr19:2529225]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539587867[chr19:2529225]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2526984 2530255 ZNF143 GTRD no Epithelial (MCF-7) 21836208
chr19 2526984 2530255 ZNF143 GTRD no Epithelial (MCF-7) 108361202
chr19 2526984 2530255 ZNF143 GTRD no Epithelial (MCF-7) 108361203
chr19 2527095 2530280 ZNF143 GTRD no Epithelial (MCF-7) 21836209
chr19 2527095 2530280 ZNF143 GTRD no Epithelial (MCF-7) 108361204
chr19 2527095 2530280 ZNF143 GTRD no Epithelial (MCF-7) 108361205
chr19 2528271 2529309 ZNF143 GTRD no Epithelial (MCF-7) 21836211
chr19 2528271 2529309 ZNF143 GTRD no Epithelial (MCF-7) 108361207
chr19 2528275 2529913 ZNF143 GTRD no Epithelial (MCF-7) 21836212
chr19 2528275 2529913 ZNF143 GTRD no Epithelial (MCF-7) 108361208
chr19 2528275 2529913 ZNF143 GTRD no Epithelial (MCF-7) 108361209
chr19 2528345 2530097 ZNF143 GTRD no Epithelial (MCF-7) 21836213
chr19 2528345 2530097 ZNF143 GTRD no Epithelial (MCF-7) 108361210
chr19 2528345 2530097 ZNF143 GTRD no Epithelial (MCF-7) 108361211
chr19 2528346 2529250 ZNF274 GTRD no Cervix (HeLa-S3) 21836214
chr19 2528346 2529250 ZNF274 GTRD no Cervix (HeLa-S3) 108361212
chr19 2528350 2530251 ZNF143 GTRD no Epithelial (MCF-7) 21836215
chr19 2528350 2530251 ZNF143 GTRD no Epithelial (MCF-7) 108361213
chr19 2528350 2530251 ZNF143 GTRD no Epithelial (MCF-7) 108361214
chr19 2528354 2530258 ZNF143 GTRD no Epithelial (MCF-7) 21836216
chr19 2528354 2530258 ZNF143 GTRD no Epithelial (MCF-7) 108361215
chr19 2528354 2530258 ZNF143 GTRD no Epithelial (MCF-7) 108361216
chr19 2528357 2530299 ZNF274 GTRD no Cervix (HeLa-S3) 21836217
chr19 2528357 2530299 ZNF274 GTRD no Cervix (HeLa-S3) 108361217
chr19 2528357 2530299 ZNF274 GTRD no Cervix (HeLa-S3) 108361218
chr19 2528384 2530300 ZNF274 GTRD no Cervix (HeLa-S3) 21836219
chr19 2528384 2530300 ZNF274 GTRD no Cervix (HeLa-S3) 108361220
chr19 2528384 2530300 ZNF274 GTRD no Cervix (HeLa-S3) 108361221
chr19 2528397 2530086 ZNF143 GTRD no Epithelial (MCF-7) 21836220
chr19 2528397 2530086 ZNF143 GTRD no Epithelial (MCF-7) 108361222
chr19 2528397 2530086 ZNF143 GTRD no Epithelial (MCF-7) 108361223
chr19 2528406 2529368 ZNF143 GTRD no Epithelial (MCF-7) 21836221
chr19 2528406 2529368 ZNF143 GTRD no Epithelial (MCF-7) 108361224
chr19 2528411 2530076 ZNF143 GTRD no Epithelial (MCF-7) 21836222
chr19 2528411 2530076 ZNF143 GTRD no Epithelial (MCF-7) 108361225
chr19 2528411 2530076 ZNF143 GTRD no Epithelial (MCF-7) 108361226
chr19 2528432 2530179 ZNF274 GTRD no Cervix (HeLa-S3) 21836223
chr19 2528432 2530179 ZNF274 GTRD no Cervix (HeLa-S3) 108361227
chr19 2528432 2530179 ZNF274 GTRD no Cervix (HeLa-S3) 108361228
chr19 2528438 2529344 ZNF143 GTRD no Epithelial (MCF-7) 21836224
chr19 2528438 2529344 ZNF143 GTRD no Epithelial (MCF-7) 108361229
chr19 2528457 2530168 AR GTRD no Prostate (PC-3) 21836225
chr19 2528457 2530168 AR GTRD no Prostate (PC-3) 108361230
chr19 2528457 2530168 AR GTRD no Prostate (PC-3) 108361231
chr19 2528476 2530197 ZBTB33 GTRD no Lung (A549) 21836226
chr19 2528476 2530197 ZBTB33 GTRD no Lung (A549) 108361232
chr19 2528476 2530197 ZBTB33 GTRD no Lung (A549) 108361233
chr19 2528490 2530061 ZNF143 GTRD no Epithelial (MCF-7) 21836227
chr19 2528490 2530061 ZNF143 GTRD no Epithelial (MCF-7) 108361234
chr19 2528490 2530061 ZNF143 GTRD no Epithelial (MCF-7) 108361235
chr19 2528496 2530131 ZNF143 GTRD no Epithelial (MCF-7) 21836228
chr19 2528496 2530131 ZNF143 GTRD no Epithelial (MCF-7) 108361236
chr19 2528496 2530131 ZNF143 GTRD no Epithelial (MCF-7) 108361237
chr19 2528505 2529385 ZNF143 GTRD no Epithelial (MCF-7) 21836230
chr19 2528505 2529385 ZNF143 GTRD no Epithelial (MCF-7) 108361239
chr19 2528506 2529558 TCF7L2 GTRD no Colon (HCT116) 21836231
chr19 2528506 2529558 TCF7L2 GTRD no Colon (HCT116) 108361240
chr19 2528510 2529253 ZNF274 GTRD no Cervix (HeLa-S3) 21836232
chr19 2528510 2529253 ZNF274 GTRD no Cervix (HeLa-S3) 108361241
chr19 2528530 2530224 ZNF143 GTRD no Epithelial (MCF-7) 21836234
chr19 2528530 2530224 ZNF143 GTRD no Epithelial (MCF-7) 108361243
chr19 2528530 2530224 ZNF143 GTRD no Epithelial (MCF-7) 108361244
chr19 2528536 2530137 ZNF143 GTRD no Epithelial (MCF-7) 21836236
chr19 2528536 2530137 ZNF143 GTRD no Epithelial (MCF-7) 108361246
chr19 2528536 2530137 ZNF143 GTRD no Epithelial (MCF-7) 108361247
chr19 2528547 2529288 ZBTB33 GTRD no Lung (A549) 21836237
chr19 2528547 2529288 ZBTB33 GTRD no Lung (A549) 108361248
chr19 2528551 2530126 ZNF143 GTRD no Epithelial (MCF-7) 21836238
chr19 2528551 2530126 ZNF143 GTRD no Epithelial (MCF-7) 108361249
chr19 2528551 2530126 ZNF143 GTRD no Epithelial (MCF-7) 108361250
chr19 2528555 2529273 TCF7L2 GTRD no Colon (HCT116) 21836239
chr19 2528555 2529273 TCF7L2 GTRD no Colon (HCT116) 108361251
chr19 2528559 2529294 ZNF143 GTRD no Epithelial (MCF-7) 21836240
chr19 2528559 2529294 ZNF143 GTRD no Epithelial (MCF-7) 108361252
chr19 2528563 2529271 ZNF274 GTRD no Cervix (HeLa-S3) 21836241
chr19 2528563 2529271 ZNF274 GTRD no Cervix (HeLa-S3) 108361253
chr19 2528566 2530090 ZNF143 GTRD no Epithelial (MCF-7) 21836242
chr19 2528566 2530090 ZNF143 GTRD no Epithelial (MCF-7) 108361254
chr19 2528566 2530090 ZNF143 GTRD no Epithelial (MCF-7) 108361255
chr19 2528572 2529389 ZNF274 GTRD no Cervix (HeLa-S3) 21836244
chr19 2528572 2529389 ZNF274 GTRD no Cervix (HeLa-S3) 108361257
chr19 2528574 2529321 ZNF143 GTRD no Epithelial (MCF-7) 21836245
chr19 2528574 2529321 ZNF143 GTRD no Epithelial (MCF-7) 108361258
chr19 2528574 2530257 TCF7L2 GTRD no Colon (HCT116) 21836246
chr19 2528574 2530257 TCF7L2 GTRD no Colon (HCT116) 108361259
chr19 2528574 2530257 TCF7L2 GTRD no Colon (HCT116) 108361260
chr19 2528577 2529314 ZBTB33 GTRD no Lung (A549) 21836247
chr19 2528577 2529314 ZBTB33 GTRD no Lung (A549) 108361261
chr19 2528577 2529360 ZNF143 GTRD no Epithelial (MCF-7) 21836248
chr19 2528577 2529360 ZNF143 GTRD no Epithelial (MCF-7) 108361262
chr19 2528593 2529402 TCF7L2 GTRD no Colon (HCT116) 21836249
chr19 2528593 2529402 TCF7L2 GTRD no Colon (HCT116) 108361263
chr19 2528597 2529229 P63 GTRD no Skin (Keratinocyte) 108361264
chr19 2528600 2529269 ZNF143 GTRD no Epithelial (MCF-7) 21836250
chr19 2528600 2529269 ZNF143 GTRD no Epithelial (MCF-7) 108361265
chr19 2528606 2529264 ZBTB33 GTRD no Lung (A549) 21836253
chr19 2528606 2529264 ZBTB33 GTRD no Lung (A549) 108361268
chr19 2528617 2529305 ZNF143 GTRD no Epithelial (MCF-7) 21836255
chr19 2528617 2529305 ZNF143 GTRD no Epithelial (MCF-7) 108361270
chr19 2528617 2530424 TCF7L2 GTRD no Colon (HCT116) 21836256
chr19 2528617 2530424 TCF7L2 GTRD no Colon (HCT116) 108361271
chr19 2528617 2530424 TCF7L2 GTRD no Colon (HCT116) 108361272
chr19 2528624 2529372 ZNF143 GTRD no Epithelial (MCF-7) 21836257
chr19 2528624 2529372 ZNF143 GTRD no Epithelial (MCF-7) 108361273
chr19 2528628 2530120 ZNF143 GTRD no Epithelial (MCF-7) 21836258
chr19 2528628 2530120 ZNF143 GTRD no Epithelial (MCF-7) 108361274
chr19 2528628 2530120 ZNF143 GTRD no Epithelial (MCF-7) 108361275
chr19 2528641 2529270 ZBTB33 GTRD no Lung (A549) 21836259
chr19 2528641 2529270 ZBTB33 GTRD no Lung (A549) 108361276
chr19 2528643 2530457 TCF7L2 GTRD no Colon (HCT116) 21836260
chr19 2528643 2530457 TCF7L2 GTRD no Colon (HCT116) 108361277
chr19 2528643 2530457 TCF7L2 GTRD no Colon (HCT116) 108361278
chr19 2528644 2529231 ZNF143 GTRD no Epithelial (MCF-7) 21836261
chr19 2528644 2529231 ZNF143 GTRD no Epithelial (MCF-7) 108361279
chr19 2528653 2530046 ZNF143 GTRD no Epithelial (MCF-7) 21836264
chr19 2528653 2530046 ZNF143 GTRD no Epithelial (MCF-7) 108361282
chr19 2528653 2530046 ZNF143 GTRD no Epithelial (MCF-7) 108361283
chr19 2528658 2529299 ZNF143 GTRD no Epithelial (MCF-7) 21836266
chr19 2528658 2529299 ZNF143 GTRD no Epithelial (MCF-7) 108361285
chr19 2528660 2529271 ZBTB33 GTRD no Lung (A549) 21836267
chr19 2528660 2529271 ZBTB33 GTRD no Lung (A549) 108361286
chr19 2528663 2529362 ZNF143 GTRD no Epithelial (MCF-7) 21836268
chr19 2528663 2529362 ZNF143 GTRD no Epithelial (MCF-7) 108361287
chr19 2528666 2529331 ZNF274 GTRD no Cervix (HeLa-S3) 21836269
chr19 2528666 2529331 ZNF274 GTRD no Cervix (HeLa-S3) 108361288
chr19 2528677 2530064 ZNF143 GTRD no Epithelial (MCF-7) 21836271
chr19 2528677 2530064 ZNF143 GTRD no Epithelial (MCF-7) 108361290
chr19 2528677 2530064 ZNF143 GTRD no Epithelial (MCF-7) 108361291
chr19 2528682 2530210 ZNF143 GTRD no Epithelial (MCF-7) 21836273
chr19 2528682 2530210 ZNF143 GTRD no Epithelial (MCF-7) 108361293
chr19 2528682 2530210 ZNF143 GTRD no Epithelial (MCF-7) 108361294
chr19 2528684 2529231 ZBTB33 GTRD no Lung (A549) 21836274
chr19 2528684 2529231 ZBTB33 GTRD no Lung (A549) 108361295
chr19 2528690 2529351 ZBTB33 GTRD no Lung (A549) 21836275
chr19 2528690 2529351 ZBTB33 GTRD no Lung (A549) 108361296
chr19 2528696 2529953 ZNF143 GTRD no Epithelial (MCF-7) 21836277
chr19 2528696 2529953 ZNF143 GTRD no Epithelial (MCF-7) 108361298
chr19 2528696 2529953 ZNF143 GTRD no Epithelial (MCF-7) 108361299
chr19 2528701 2529360 ZNF143 GTRD no Epithelial (MCF-7) 21836278
chr19 2528701 2529360 ZNF143 GTRD no Epithelial (MCF-7) 108361300
chr19 2528706 2529281 ZNF143 GTRD no Epithelial (MCF-7) 21836279
chr19 2528706 2529281 ZNF143 GTRD no Epithelial (MCF-7) 108361301
chr19 2528712 2529341 ZNF143 GTRD no Epithelial (MCF-7) 21836280
chr19 2528712 2529341 ZNF143 GTRD no Epithelial (MCF-7) 108361302
chr19 2528758 2529303 ZNF143 GTRD no Epithelial (MCF-7) 21836281
chr19 2528758 2529303 ZNF143 GTRD no Epithelial (MCF-7) 108361303
chr19 2528762 2530157 ZBTB33 GTRD no Lung (A549) 21836282
chr19 2528762 2530157 ZBTB33 GTRD no Lung (A549) 108361304
chr19 2528762 2530157 ZBTB33 GTRD no Lung (A549) 108361305
chr19 2528764 2529975 ZNF143 GTRD no Epithelial (MCF-7) 21836284
chr19 2528764 2529975 ZNF143 GTRD no Epithelial (MCF-7) 108361307
chr19 2528764 2529975 ZNF143 GTRD no Epithelial (MCF-7) 108361308
chr19 2528809 2529265 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21836291
chr19 2528809 2529265 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108361316
chr19 2528845 2529315 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21836297
chr19 2528845 2529315 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108361322
chr19 2528845 2529359 ZNF143 GTRD no Epithelial (MCF-7) 21836298
chr19 2528845 2529359 ZNF143 GTRD no Epithelial (MCF-7) 108361323
chr19 2529205 2529225 RREB1 JASPAR yes 112069813
chr19 2529208 2529228 RREB1 JASPAR yes 112069817
chr19 2529209 2529229 RREB1 JASPAR yes 112069818
chr19 2529209 2529880 ZBTB33 GTRD no Brain (SK-N-SH) 21836303
chr19 2529209 2529880 ZBTB33 GTRD no Brain (SK-N-SH) 108361330
chr19 2529209 2530203 ZNF274 GTRD no Bone Marrow (K562) 21836304
chr19 2529209 2530203 ZNF274 GTRD no Bone Marrow (K562) 108361331
chr19 2529213 2529233 RREB1 JASPAR yes 112069820
chr19 2529215 2529230 FOXA1 JASPAR yes 112069821
chr19 2529215 2529235 RREB1 JASPAR yes 112069822
chr19 2529216 2529228 FOXI1 JASPAR yes 112069823
chr19 2529216 2529231 FOXP1 JASPAR yes 112069824
chr19 2529217 2529229 FOXC2 JASPAR yes 112069825
chr19 2529219 2529230 FOXA1 JASPAR yes 112069826
chr19 2529220 2529235 FOXP1 JASPAR yes 112069827
chr19 2529224 2530225 ZBTB33 GTRD no Brain (SK-N-SH) 21836305
chr19 2529224 2530225 ZBTB33 GTRD no Brain (SK-N-SH) 108361332
Genes associated with rs539587867[chr19:2529225], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More